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William (BJ) Jones, Jr.

Independent Director at Apogee Therapeutics
Board

About William (BJ) Jones, Jr.

William (BJ) Jones, Jr. is an independent Class III director (age 62 as of April 29, 2025) who has served on Apogee Therapeutics’ Board since June 2023 and previously served on the board of managers of Apogee Therapeutics, LLC from May–July 2023. He is Chief Commercial Officer at NewAmsterdam Pharma (Nasdaq: NAMS) since August 2023, and brings biopharma commercialization leadership from Biohaven Pharmaceuticals (2019–2022) and Takeda (2016–2019). He holds a B.S. from the U.S. Air Force Academy, an M.S. from Texas A&M University, and an MBA from Stanford GSB; Apogee cites his drug development and commercial strategy expertise as qualifying credentials.

Past Roles

OrganizationRoleTenureCommittees/Impact
Apogee Therapeutics, Inc.Independent Director (Class III)Since June 2023Nominating Committee Chair; Compensation Committee member
Apogee Therapeutics, LLCBoard of Managers memberMay 2023 – July 2023Pre-IPO governance
NewAmsterdam Pharma (NAMS)Chief Commercial OfficerSince Aug 2023Commercial leadership
Biohaven Pharmaceuticals (subsidiary of Pfizer)Chief Commercial Officer, Migraine & Common DiseasesApr 2019 – Dec 2022Launched first FDA-approved product (Nurtec ODT)
Takeda Pharmaceutical (TAK)VP, Head of Sales & Commercial Operations (General Medicine)Jan 2016 – Mar 2019Built commercial operations

External Roles

OrganizationRoleTenureCommittees/Impact
Annexon Biosciences (ANNX)DirectorSince Jan 2025Board service (committee roles not disclosed)
Akili, Inc. (AKLI)DirectorAug 2022 – Jul 2024Board service (committee roles not disclosed)

Board Governance

  • Independence: The Board determined Jones qualifies as an independent director under Nasdaq rules; all Audit and Compensation Committee members meet heightened SEC criteria.
  • Committees: Nominating Committee Chair; Compensation Committee member. Audit Committee Chair is Jennifer Fox; Mark C. McKenna is Independent Chair of the Board.
  • Attendance and engagement: The Board met five times in 2024; each director attended at least 75% of Board and applicable committee meetings; all directors attended the 2024 annual meeting.
  • Committee activity: 2024 meetings — Audit (4), Compensation (5), Nominating (3).
  • Executive sessions: Independent directors meet in executive session at every regular Board meeting.

Fixed Compensation

ComponentPolicy (Effective Feb 2024)Policy (Amended Mar 2025; effective at 2025 Annual Meeting)Jones’s 2024 Cash (Actual)
Board Annual Retainer (non-Chair)$40,000$40,000$40,000
Committee Member — Compensation$5,000$7,500$5,000
Committee Chair — Nominating$8,000$10,000$8,000
Total Cash Fees$53,000

Notes:

  • Other retainers: Audit member $7,500 (raised to $10,000); Compensation Chair $10,000 (raised to $15,000); Audit Chair $15,000 (raised to $20,000); Board Chair $70,000.

Performance Compensation

Equity ElementPolicy (Feb 2024)Policy (Amended Mar 2025; effective at 2025 Annual Meeting)Jones’s 2024 Equity (Actual)Vesting
Initial Option Grant$700,000 FV (cap 60,000 options)$800,000 FV (cap 35,000 options)Not applicable in 2024Vests annually over 3 years
Annual Option Grant$350,000 FV (cap 30,000 options)$400,000 FV (cap 17,500 options)$349,828 FV; 10,370 optionsVests on 1-year anniversary

Important clarifications:

  • The proxy notes 2024 awards of 10,370 options to each non-employee director (including Jones). It also states “as of December 31, 2024, Mr. Jones held no options,” while the beneficial ownership table (as of April 21, 2025) includes 10,370 options that have vested or will vest within 60 days, indicating post-year-end vesting/recognition.

Other Directorships & Interlocks

CompanyRelationship to APGEInterlock/Overlap
NewAmsterdam Pharma (NAMS)No APGE-related transactions disclosedEmployment role; no APGE overlap disclosed
Annexon Biosciences (ANNX)No APGE-related transactions disclosedBoard role from Jan 2025; no APGE overlap disclosed
Akili, Inc. (AKLI)No APGE-related transactions disclosedPast board role; no APGE overlap disclosed

Contextual shareholder influence (APGE):

  • Significant holders (Fairmount, Venrock) have directors (Harwin, Kiselak, Shah) affiliated; insider participation in the IPO included purchases by entities affiliated with Fairmount and Venrock. No related-party transactions involving Jones are disclosed.

Expertise & Qualifications

  • Core skills: Drug development, commercial strategy, execution of launches (Nurtec ODT) and scaling commercial operations.
  • Education: B.S. in human factors engineering (U.S. Air Force Academy); M.S. in industrial engineering (Texas A&M); MBA (Stanford GSB).

Equity Ownership

HolderVoting CommonNon‑Voting CommonTotal % OwnershipVoting PowerNotes
William (BJ) Jones, Jr.27,782<1%<1%Includes 1,451 restricted voting shares and 10,370 options vesting/vested within 60 days of Apr 21, 2025

Company-wide equity plan context:

  • As of Dec 31, 2024: 5,422,978 securities underlying outstanding options; weighted average exercise price $35.12; 4,655,703 shares available for future issuance under plans (excluding evergreen increases added Jan 1, 2025).

Governance Assessment

  • Board effectiveness: Jones’ independent status, leadership as Nominating Committee Chair, and Compensation Committee membership support governance rigor on director succession and pay; committee meeting cadence (Nominating: 3; Compensation: 5 in 2024) indicates active oversight.
  • Independence and attendance: The Board reports all directors attended ≥75% of meetings; Jones is specifically listed as independent, bolstering investor confidence in objective oversight.
  • Compensation alignment: Jones’s 2024 director pay is heavily equity-oriented (options $349,828 vs cash $53,000), aligning director incentives with shareholder outcomes; vesting schedules are time‑based (no disclosed performance metrics), which is typical for early-stage biotech boards but reduces direct pay-for-performance rigor.
  • Policy changes (2025): Increases to option grant fair values and committee chair/member retainers reflect expanding responsibilities and market alignment; investors should monitor aggregate director pay versus governance outcomes to avoid pay inflation risk.
  • Shareholder signal: 2024 shareholder approval of a separate 100,000 director option grant (40.43M votes for) suggests investor tolerance for targeted director equity when justified, though not directly related to Jones.

RED FLAGS to monitor

  • Elevated equity awards without performance conditions (options vest on time schedules, not on KPIs) may dilute pay-for-performance linkage; oversight rests with Compensation Committee on setting robust executive metrics even if director equity remains time-based.
  • Time commitments: Concurrent CCO role at NAMS plus external board service necessitates sustained attendance; Board reports adequate attendance in 2024, but continued monitoring is prudent.

Director Compensation (2024 Actual)

NameOption Awards ($)Stock Awards ($)Fees Earned ($)Total ($)
William (BJ) Jones, Jr.$349,828$53,000$402,828

Committee Assignments (2024) and Meetings

DirectorAudit CommitteeCompensation CommitteeNominating Committee# of Meetings (2024)
William (BJ) Jones, Jr.MemberChairAudit: 4; Compensation: 5; Nominating: 3

Beneficial Ownership Detail (as of April 21, 2025)

ItemDetail
Voting common shares27,782
Non-voting common shares0
ComponentsIncludes 1,451 restricted voting shares and 10,370 options vesting/vested within 60 days
Ownership % and Voting PowerEach <1% (asterisked in proxy table)

Shareholder Voting Context (2024)

ProposalResult
Election of Class I Directors (Gottesdiener, Harwin, Henderson)All elected; votes detailed by nominee
Auditor ratification (E&Y)Approved (41,560,000 for)
Approval of 100,000 director option grantApproved (40,430,389 for)

Related-Party Transactions (Context)

  • IPO insider participation: Entities affiliated with Fairmount purchased 2,941,176 shares ($49,999,992) and Venrock purchased 1,750,000 shares ($29,750,000) in the 2023 IPO; no Jones-specific related-party transactions disclosed.