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Aptose Biosciences Inc. (APTO)·Q4 2024 Earnings Summary

Executive Summary

  • FY 2024 expenses fell sharply and losses narrowed: Operating expenses decreased 49.8% YoY to $26.3M, net loss improved to $25.4M, and net loss per share to $(36.38), reflecting scaled-down program activity and lower G&A .
  • Clinical execution advanced: Aptose initiated the TUSCANY Phase 1/2 frontline AML triplet (TUS+VEN+AZA), reported early complete remissions at 40 mg and escalated to 80 mg without significant safety concerns; it also entered an NCI myeloMATCH CRADA and presented supportive ASH/AACR data .
  • Liquidity runway remains short: Cash was $6.7M at year-end with runway guided through April 2025; financing actions included a $10M Hanmi loan, an $8M public offering, and a $1.5M debt-to-equity conversion; Nasdaq minimum bid price compliance was regained, but shareholders’ equity remains below requirements under an exception .
  • Estimate context: S&P Global consensus EPS and revenue estimates for APTO were unavailable for Q4/FY 2024; therefore, beats/misses vs Street cannot be assessed (S&P Global consensus unavailable).

What Went Well and What Went Wrong

What Went Well

  • “Tuspetinib brings favorable safety and broad activity across AML genetic subtypes to the TUS+VEN+AZA triplet therapy… We look forward to sharing more data as the trial evolves.” — William G. Rice, Ph.D., CEO, highlighting early CRs including MRD-negative at 40 mg and dose escalation approval to 80 mg .
  • “Initiation of the trial is a key milestone… if TUS brings added efficacy… without added toxicities… we may have a game changer in TUS.” — CEO on TUSCANY launch and potential frontline impact .
  • “TUS targets known VEN resistance mechanisms, and in combination with VEN, could prevent emergence of resistance… may target AML’s greatest unmet needs and largest markets.” — CMO on ASH data supporting triplet strategy .

What Went Wrong

  • Cash runway only until April 2025 based on current operations; cash $6.7M and shareholders’ deficit $(4.543)M at year-end, underscoring financing risk and negative equity .
  • Nasdaq: although minimum bid price compliance was regained, Aptose remains out of compliance with the $2.5M shareholders’ equity requirement and is operating under a panel exception; earlier notices detailed deficiencies and appeal needs .
  • Reduced R&D reflects scaled-down activity (APTIVATE completion, lower manufacturing), potentially slowing pace of new data generation absent incremental funding; Tuspetinib program costs fell to $9.6M from $24.9M YoY .

Financial Results

Quarterly Operating Performance (oldest → newest)

MetricQ2 2024Q3 2024
Operating Expenses ($USD Thousands)$7,345 $6,965
Other Income, Net ($USD Thousands)$93 $12
Net Loss ($USD Thousands)$(7,252) $(6,953)
Net Loss per Share (Basic/Diluted, $USD)$(0.43) $(0.37)

Annual Operating Performance

MetricFY 2023FY 2024
Operating Expenses ($USD Thousands)$52,356 $26,257
Other Income, Net ($USD Thousands)$1,149 $827
Net Loss ($USD Thousands)$(51,207) $(25,430)
Net Loss per Share (Basic/Diluted, $USD)$(227.43) $(36.38)

R&D Breakdown (Annual)

R&D Component ($USD Thousands)FY 2023FY 2024
Program Costs – Tuspetinib$24,925 $9,606
Program Costs – Luxeptinib$3,510 $422
Program Costs – APTO-253$40 $(19)
Personnel Related Expenses$6,878 $4,735
Stock-Based Compensation$1,373 $346
Depreciation of Equipment$39 $13
Total R&D$36,765 $15,103

Balance Sheet Trend (oldest → newest)

MetricDec 31, 2023Jun 30, 2024Sep 30, 2024Dec 31, 2024
Cash, Cash Equivalents & Restricted Cash ($USD Thousands)$9,252 $8,330 $7,962 $6,707
Working Capital ($USD Thousands)$(3,375) $(2,552) $477 $5,071
Total Assets ($USD Thousands)$12,989 $10,949 $10,929 $10,127
Long-Term Liabilities ($USD Thousands)$621 $414 $10,305 $10,211
Shareholders’ Equity/Deficit ($USD Thousands)$(2,901) $(2,176) $(9,134) $(4,543)

Estimates vs Actuals

MetricQ4 2024 ConsensusQ4 2024 ActualFY 2024 ConsensusFY 2024 Actual
Revenue ($USD)N/A (S&P Global consensus unavailable)Not reported N/A (S&P Global consensus unavailable)Not reported
Primary EPS ($USD)N/A (S&P Global consensus unavailable)Not disclosed quarterly in 8-K N/A (S&P Global consensus unavailable)$(36.38)

Segment breakdown: Not applicable; Aptose reports at the company level .

KPIs: Clinical milestones (trial initiation, dose escalation approvals, CR/MRD signals) — see Guidance Changes and Call Themes sections .

Guidance Changes

MetricPeriodPrevious GuidanceCurrent GuidanceChange
Cash RunwayAs of Q2 2024Through August 2024 Through January 2025 (Q3 update) Raised
Cash RunwayAs of Q3 2024 → Year-endThrough January 2025 Through April 2025 Raised
Nasdaq Compliance – Minimum Bid Price2024In deficiency; 180-day period to 1/10/2025 Regained compliance on 3/14/2025 (≥$1.00 for 10 days) Raised/achieved
Nasdaq Compliance – Shareholders’ Equity2024–2025In deficiency; hearing scheduled 11/21/2024 Panel extension; must evidence ≥$2.5M equity by 3/31/2025; operating under exception Maintained deficiency with deadline
Triplet Trial (TUS+VEN+AZA)2024Initiation planned Q4 2024 Initiated 11/20/2024; dosing at 40 mg; escalated to 80 mg Achieved/advanced
CR/MRD/Safety Data Readout1H 2025Planned Expected in 1H 2025 Maintained
Hanmi Co-Development Agreement2024 YECompletion targeted by YE 2024 Expect execution in 1H 2025; $1.5M debt converted; negotiating collaboration Delayed/timing shift
EHA 2025 ReadoutMid-2025Planned Planned Maintained

Earnings Call Themes & Trends

TopicPrevious Mentions (Q-2, Q-1)Current Period (Q4/FY 2024)Trend
Frontline triplet (TUS+VEN+AZA)FDA allowed 40 mg TUS in triplet; triplet protocol ready TUSCANY initiated; early CRs at 40 mg, escalation to 80 mg approved; no significant safety concerns Accelerating execution
Product performance (TUS breadth/safety)Broad activity across AML subgroups; potential “game-changer” in triplet ASH poster showed activity across populations, VEN resistance mechanisms; AACR paper on unique MOA and synthetic lethality Strengthening clinical/Preclinical narrative
Regulatory/Clinical collaborationsProtocol reviewed by FDA NCI myeloMATCH CRADA executed for AML/MDS combinations Expanding external validation
Nasdaq & listing complianceDeficiency notices; hearing scheduled Panel extension; minimum bid compliance regained; equity requirement still pending under exception Mixed: price compliance improved, equity outstanding
R&D execution & spendR&D lower on reduced APTIVATE/manufacturing; Tuspetinib program costs down FY R&D down further; focus on triplet and co-dev; personnel and SBC reductions Leaner cost base

Management Commentary

  • “Tuspetinib brings favorable safety and broad activity across AML genetic subtypes to the TUS+VEN+AZA triplet therapy… achieved complete remissions… including MRD negative remission.” — William G. Rice, Ph.D., CEO .
  • “Tuspetinib… is a potential game-changer as part of a triplet therapy regimen and we continue to advance its development.” — CEO .
  • “We are pleased that our triplet protocol… has been allowed to proceed at the 40 mg dose… we remain committed to securing financing to pursue its development.” — CEO .
  • “If TUS brings added efficacy… without the added toxicities… we may have a game changer in TUS.” — CEO on trial initiation .
  • “We’re grateful to be a part of NCI’s myeloMATCH… Tuspetinib will provide… an investigational agent that can be used to treat a broad spectrum of AML/MDS populations.” — CEO .
  • “TUS targets known VEN resistance mechanisms… could prevent emergence of resistance to both agents… may target AML’s greatest unmet needs.” — CMO .

Q&A Highlights

  • No Q4 2024 earnings call transcript was available in the document set; Q&A highlights could not be assessed. We searched the catalog and found no APTO Q4 2024 transcript [Search attempt returned no APTO results in Mar–Apr 2025].

Estimates Context

  • S&P Global Wall Street consensus for Q4 2024 and FY 2024 EPS and revenue was unavailable for APTO; we could not retrieve consensus or compare actuals to estimates (S&P Global consensus unavailable).
  • Aptose does not report product revenue; comparison would focus on EPS and cash metrics, which were not covered by available consensus for this period .

Key Takeaways for Investors

  • Liquidity overhang persists: cash guided through April 2025 with negative equity; expect ongoing financing needs and potential dilution absent near-term collaboration payments or milestone funding .
  • Clinical catalysts in 1H–mid 2025: CR/MRD/safety data from TUSCANY and an EHA 2025 readout could be stock-moving; early CRs and dose escalation already de-risked safety at initial levels .
  • Strategic validation: NCI myeloMATCH CRADA and ASH/AACR data strengthen the triplet thesis and breadth across AML subgroups, including FLT3 wildtype and prior-VEN failures .
  • Nasdaq compliance trajectory: minimum bid price regained; equity requirement still pending under exception through March 31, 2025 — listing status remains a near-term risk factor .
  • Cost discipline: FY operating expenses declined ~50% YoY; R&D reductions reflect completed trials and focus on triplet, potentially extending runway modestly while the company pursues funding .
  • Hanmi relationship evolving: $10M facility complete; $1.5M debt-to-equity conversion executed; co-development agreement expected in 1H 2025, which could provide non-dilutive/structured funding .
  • Trading implications: Near-term price action likely keyed to clinical updates, equity compliance developments, and financing prints; medium-term thesis hinges on differentiated safety/activity enabling a mutation-agnostic frontline triplet in AML .