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Crinetics Pharmaceuticals, Inc. (CRNX)·Q3 2025 Earnings Summary

Executive Summary

  • Q3 marked the first quarter post-FDA approval of PALSONIFY (paltusotine) for acromegaly (9/25/25), with the U.S. launch “off to a very good start,” though no product revenue was recognized in Q3 due to timing; first commercial shipments occurred in early Q4, so launch revenue will appear in Q4 results .
  • Results missed S&P Global Street consensus: Revenue $0.14M vs $0.39M estimate and EPS -$1.38 vs -$1.25 estimate, driven by the lack of Q3 product revenue and higher OpEx to support launch and late‑stage pipeline; EBITDA undershot as well (details in tables; S&P Global) *.
  • Management reiterated 2025 cash burn guidance ($340–$370M) and runway into 2029; Q3 OpEx rose sequentially on clinical programs and commercialization build, and cash/short-term investments ended at $1.09B (9/30) .
  • Early launch indicators are constructive: 95% of top priority HCPs contacted, ~95% of filled prescriptions from switch patients, ~50% of filled prescriptions reimbursed, and broad early approvals across commercial, Medicare, and Medicaid plans—formal formulary processes expected to take 6–9 months .

What Went Well and What Went Wrong

What Went Well

  • PALSONIFY approval and launch momentum: “historic day” with first once‑daily oral acromegaly treatment; team executing “seamlessly,” with HCP and patient feedback supportive and early payer experience favorable .
  • Early access and payer dynamics: prior authorizations “mostly straightforward,” some approvals up to 12 months even before formulary placement; ~50% of filled prescriptions reimbursed early in launch .
  • Pipeline execution: multiple late‑stage programs advancing (CAH adult Phase 3 sites activated, pediatric program ready to start; carcinoid syndrome Phase 3 screening; NDC candidate CRN09682 Phase 1/2 sites activated) .

What Went Wrong

  • Q3 revenue/EPS miss vs consensus due to timing of approval/product shipments (no Q3 product revenue recognized under GAAP) and higher OpEx tied to launch and clinical activities * *.
  • R&D and SG&A stepped up YoY and QoQ, reflecting headcount, CMC, trial startup, and commercial build; net loss widened to $130.1M vs $76.8M YoY .
  • Preclinical timing shifts: TSHR antagonist pivoted to an alternative candidate; SST3 program requires follow‑up preclinical work, postponing IND submission .

Financial Results

P&L and Operating Metrics (USD Millions, except per-share)

MetricQ1 2025Q2 2025Q3 2025
Revenue$0.361 $1.031 $0.143
R&D Expense$76.2 $80.3 $90.5
SG&A Expense$35.5 $49.8 $52.3
Net Loss$(96.8) $(115.6) $(130.1)
Diluted EPS$(1.04) $(1.23) $(1.38)
EBITDA$(110.5)*$(128.2)*$(141.6)*
  • Cash, cash equivalents & investments: $1,274.1 as of 3/31/25 ; $1,196.4 as of 6/30/25 ; $1,092.3 as of 9/30/25 .

Note: Asterisked values retrieved from S&P Global.*

Q3 2025 Actuals vs S&P Global Consensus

MetricActualConsensusBeat/Miss
Revenue (USD Millions)$0.143 $0.394*Miss
EPS (USD)$(1.38) $(1.25)*Miss
EBITDA (USD Millions)$(141.6)*$(119.6)*Miss

Note: Asterisked values retrieved from S&P Global.*

Explanation: Management confirmed no PALSONIFY product revenue recognized in Q3 due to approval at quarter‑end; initial shipments occurred in early Q4, so launch revenue will be recognized in Q4 under GAAP .

KPIs and Launch Indicators

KPIQ3 2025
Top priority HCPs contacted>95%
Mix of filled prescriptions~95% switch / ~5% naïve
Reimbursement status~50% of filled prescriptions reimbursed
Prescriber mix~70% community / ~30% pituitary treatment centers
OLE patients transitioning to commercial22 U.S. patients in process
Cash used in operations (quarter)$110.7M (timing of payables)
Shares outstanding (as of 10/28/25)~94.9M basic; 111.9M fully diluted

Guidance Changes

MetricPeriodPrevious GuidanceCurrent GuidanceChange
Net cash used in operationsFY 2025$340–$370M (Q2) (down from $340–$380M in Q1) $340–$370M (reiterated) Maintained vs Q2; lower vs Q1
Cash runwayMulti‑yearInto 2029 (Q2) Into 2029 (reiterated) Maintained

No revenue/earnings guidance was issued; management indicated Q4 will include PALSONIFY launch revenue and the company will provide launch KPIs (new patient starts, unique prescribers, payer progress) with Q4 results in January .

Earnings Call Themes & Trends

TopicPrevious Mentions (Q1 & Q2 2025)Current Period (Q3 2025)Trend
U.S. PALSONIFY launch setup and payer accessPre‑approval payer engagement; anticipated PA aligned to label; formulary 6–9 months; build-out of ~30‑rep field force Launch “off to a very good start” with broad early approvals (commercial/Medicare/Medicaid); some 12‑month approvals; ~50% reimbursed filled Rx; formulary still 6–9 months Positive early adoption; access tracking to plan
Prescriber dynamicsFocus on pituitary centers and community endos ~70% community / ~30% PTC prescribers; 110 top prescribers targeted; admin set‑up at centers ongoing Faster community uptake; centers progressing
Revenue timingExpected post‑approval recognition No Q3 product revenue; shipments early Q4 → revenue in Q4 Deferral to Q4 confirmed
CAH (atumelnant) developmentAdult Phase 3 design “uncompromising” endpoint; pediatric seamless Phase 2/3; OLE enrolling Adult Phase 3 sites activated/screening; pediatric study set to begin; Cohort 4 Phase 2 data and OLE 13‑week data in early 2026 On track; near‑term data in early 2026
Carcinoid syndrome (paltusotine)Phase 3 initiation in H2’25 >20 sites activated and screening; first randomizations expected Q4’25 Advancing enrollment
NDC platform (CRN09682)IND cleared; study to begin Phase 1/2 sites activated, screening; first‑in‑human POC targeted Advancing to POC
Preclinical portfolioTSH/SST3/PTH IND plans TSHR shifted to alternate candidate; SST3 IND submission postponed Mixed timing updates

Management Commentary

  • “September 25, 2025 was a historic day for Crinetics… Since approval, our team has executed seamlessly to get Palsonify to patients and the launch is off to a very good start.” — Scott Struthers, CEO .
  • “Prior authorizations have been mostly straightforward, and in some cases, reimbursement has been approved for up to 12‑month supplies… we’re seeing meaningful numbers of patients starting on reimbursed Palsonify.” — Scott Struthers (prepared remarks) .
  • “Our goal remains to make Palsonify the first treatment of choice for all acromegaly patients, and we are perfectly on pace relative to our expectations.” — Isabel Kalofonos, CCO .
  • “We used $110.7 million of cash in operations during the quarter… slightly higher than anticipated this quarter, primarily due to timing of payables… we ended the quarter with $1.1 billion in cash, cash equivalents, and investments.” — Toby Schilke, CFO .

Q&A Highlights

  • Payer/access and Quick Start: Company prioritizes reimbursement via specialty pharmacy PAs; Quick Start bridges pending verifications. Aim to keep Quick Start duration below rare disease average (~57 days); some early approvals for 6–12 months; no commercial rebates/contracts planned .
  • Prescriber mix & activation: Community endos are more nimble early; centers progressing through admin workflows (EHR and pharmacy setup). ~70% community vs ~30% PTC prescribers; 110 top prescribers targeted .
  • Distribution/data capture: Closed distribution; data not broadly available (e.g., IQVIA) during launch .
  • Launch metrics disclosure: With Q4 results, plan to share revenue, new patient starts, unique prescribers, and payer progress .
  • CAH program clarifications: Adult Phase 3 “uncompromising” composite endpoint; PM dosing in Phase 3; Cohort 4 (AM dosing) exploratory; pediatric program seamless Phase 2/3 with flexibility to taper GCs; early 2026 readouts expected .

Estimates Context

  • Q3 2025 vs S&P Global consensus: Revenue $0.143M vs $0.394M estimate (miss), EPS -$1.38 vs -$1.25 estimate (miss), EBITDA -$141.6M vs -$119.6M estimate (miss). Misses reflect lack of Q3 product revenue recognition and higher OpEx to support launch and late‑stage pipeline; shipments occurred in early Q4, so revenue shifts into Q4 under GAAP *.
  • Estimate implications: Street models likely need to shift initial U.S. PALSONIFY revenue from Q3 to Q4 and fine-tune Q4/Q1 launch ramp (formulary glidepath 6–9 months; payer approvals already occurring); OpEx trajectory consistent with launch and trial ramp and previously communicated guidance .

Note: Asterisked values retrieved from S&P Global.*

Key Takeaways for Investors

  • Launch off to a constructive start with favorable early payer experience and strong community endo uptake, but financial recognition lags by one quarter due to approval/shipment timing—expect first meaningful PALSONIFY revenue in Q4 .
  • Q3 miss vs consensus is largely mechanical (no product revenue) and investment‑driven; reiteration of 2025 cash burn and runway into 2029 de‑risks funding for multi‑year execution .
  • Near‑term catalysts: January Q4 results with launch KPIs; early 2026 CAH Cohort 4 and OLE data; continued enrollment in CAH adult Phase 3 and carcinoid syndrome Phase 3; first-in-human NDC data flow as program advances .
  • Watch early launch KPIs (reimbursement conversion from Quick Start, prescriber breadth, switch vs naïve mix); community prescriber traction may accelerate uptake ahead of full formulary access .
  • Strategic focus intact: building first‑line positioning in acromegaly, progressing broader endocrine pipeline (CAH adult/peds, carcinoid syndrome), while rationalizing preclinical assets (TSHR/SST3 timing adjustments) .
  • Distribution is closed and data are not widely syndicated early in the launch, which may limit third‑party script visibility; rely on company‑reported KPIs and financials for near‑term tracking .
  • Risk balance: execution on payer/formulary access and prescriber activation vs. macro reimbursement and rare disease cadence; guidance consistency and cash runway mitigate financing risk near term .

Sources:

  • Q3 2025 8‑K and press release: financials, launch updates, guidance .
  • Q3 2025 earnings call transcript: launch commentary, revenue timing, OpEx detail, KPIs, Q&A .
  • FDA approval 8‑K (9/25/25): approval details and context .
  • Prior quarters (Q1/Q2 2025) for trend analysis and prior guidance .

Note on S&P Global data: Asterisked estimate and EBITDA values retrieved from S&P Global.*